SHAPE-IT

The program SHAPE-IT allows a rapid and accurate inference of haplotypes from population genotype data. It relies on the genetic model initially published by M. Stephens and P. Donnelly ( Am J Hum Genet 2003, 73 :1162-1169) but it uses the new algorithm developed by our group for the rapid computation of hidden Markov models.

For any use of Shape-IT or publication one must cite :

Delaneau O, Coulonges C, Zagury JF. SHAPE-IT : a new rapid and accurate haplotyping software. BMC Bioinformatics, 2008;9:540

 

• Licensing Information

Academic License

 

  • An academic license is available to users at academic and nonprofit research institutions at no charge. Please click on the academic license button to access the academic license.

 

 

Commercial License

  • A specific license must be obtained for any commercial or for-profit organization or for any web-diffusion purpose. For more information one needs to contact Prof. Zagury at :

Chaire de Bioinformatique

CNAM

292 rue Saint-Martin

75003 – PARIS

Tel : 33 1 58 80 88 20

Mail : zagury@cnam.fr